![]() Instant rewind and replay of time-lapse recordings.Create instant multiview and multicolor renderings.Adjust the transfer functions, edit volumes, point lists, landmark-based registration, transformations, 3D Content in PDFsĪ tool for live rendering volumetric multi-channel data.Stacks can be displayed as texture-based volume renderings, surfaces, or orthoslices.Plugin NameĪ tool for hardware-accelerated visualization possibilities for image stacks, using the Java 3D library. Here we summarize some of the 3D visualization plugins in ImageJ. The Adjust submenu contains commands that adjust Brightness/Contrast, Threshold levels, and image Size. Histogram of a randomized calibrated 8-bit image with the phase LUT appliedįor further reading about color maps, see and Adjusting your Image in ImageJ Histogram of the M51 Galaxy sample image with the displayed range adjusted and the HiLo LUT applied Normal gray-scale LUT for all other valuesĪssessment of over-/under-exposure in an image.Histogram of the M51 Galaxy sample image with the mpl-viridis LUT applied ![]() Quantitative display of positive values on a continuous scale ![]() Here’s a list of recommended options to choose a LUT: LUT Name When analyzing quantitative data in an image, a false-color LUT (in this case also referred to as color map) can increase the visibility of low-contrasted features in the image and help the human eye to compare different images. an overlay of all channels), each channel can be assigned a monochrome false-color LUT, e.g. To display a multi-channel fluorescence image in composite mode (i.e. by monochrome cameras or with photomultipliers): each channel contains just intensity values. More information on this topic can be found on the Color Image Processing page.įluorescence images are usually acquired without color information (i.e. When working with an image of higher bit depth, its intensity values are binned into 256 levels between minimum and maximum (see section Brightness/Contrast), and the LUT is applied onto these binned levels. ![]() In the ImageJ user interface, LUTs are always 8-bit. ![]()
0 Comments
Leave a Reply. |
AuthorWrite something about yourself. No need to be fancy, just an overview. ArchivesCategories |